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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911443.1_cds_XP_016461415.1_54738
CDS Infomation

[gene=LOC107784752] [db_xref=GeneID:107784752] [protein=putative polyketide hydroxylase isoform X2] [protein_id=XP_016461415.1] [location=complement(join(12117..12518,16964..17117,17366..17585,17745..17841,17949..18061,19198..19372,19582..19629,19759..20243,20946..20958))] [gbkey=CDS]
Sequence

ATGCAGCCTCAAGATTTTGATCGGATTGTGAGTCCTGTCTCTGTTGCACACTTCTCCCAG
TACAAGCTCTCCAGGTTACTGCTGAAGCACCTTGAGAAACTCGATTTCTGTATGATAAAC
TCTGAAAAGCGTGAGCATGGCTCTATTGGCGAGAGGAAGATCTTTATGGGGCATGAGTGC
ATAGCAATCAATGATGCTGATCATGGAGTCAGTGTAACGGCATCTTTCCTTACTGAAGGG
AAGTATATAAAGAGAGATATTCAGTGTCGTTTCCTTGTTGGTACAGATGGTGCAGGAAGT
ACCGTCAGAAAGTCCTTAGGAATTAACATGAGAGGTGAAAAGGACTTACAAAATCTTGTT
AGTGTCCACTTCCAAAGCCAAGAGTTAGGGAAGTATCTCATCAAAGAAAGACCTGGCATG
CTGTTTTTCATCTTTAATAAAGATGCTATTGGTGTTCTTGTTGCGCATGATCTCAAGCAA
GGGGAATTTGTCCTGCAGGTACCATTTTATCCACCTCAACAAAAGCTTGAGGACTTTAGT
TGCGAGATGTGTAAGAGATTGATTTTCAAATTGATCGGCCAAGAGCTTGCAGACGTCAAT
GTGATGGATATTAAGCCTTGGGTGATGCATGCTGAAGTAGCTGAGAAGTTTCTGTCTCGT
AACAACAGGATAATCCTTGCTGGTGATGCTGCTCATCGATTTCCTCCTGCCGGTGGTTTT
GGGATGAATACTGGTATTCAAGATGCTCATAATCTTGCGTGGAAATTAGCTTCTGTAATC
AAGGGTATCTCACCAATATCAATTCTTACCTCGTATGAACTAGAACGTAGTCAGATAGCC
CAATTTAATACAGCACTTAGCGTCCAAAACTTTAAGGCGGCAATGAGAGTTCCTGCTGCA
CTTGGTCTTGATCCAACAATAGCAAATGCAGTACATCGAGCTCTTAATAACACGGTTGGT
TCTGTTCTGCCATCTGGACTTCAAAGGACAATATTAGATGGAATATTCAGCATTGGTCGT
GCACAACTCTCAGATTTTGTATTGAATGAAAATAATCCACTTGGATCTGCAAGGCTAGCA
AAAGTAAGACAGATATTTGAAGGAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGAT
CTTGGTTTCAGGTACCGAAAAGGAGCATTCGTGTTTGATGATTTTAGTGGGTTGAATGCG
CATGAAGCACCTTCAGGACGAAGGAGGGATTATATTCCTTGCTCGGAACCTGGATCAAGG
CTCCCTCATATGAATGTTAAACTGCTTTCTAACCCGTCAAGTAAGGAAATATTCTCTACT
CTAGACCTTGTATCTGGAGATAAGGTTGAGTTTGTCCTTATAATAGCACCACTGGAGGAG
TCCTACTATCTAGCTCGAGCTGCTATAGAGGTGGCGAACAATTTTAAAGTGCCTTTAAAG
GTTTGTGTAATATGGCCAAACGGAAGTATTAATGAAACCGGAAGAAGTGAGGCTGCATCG
ACTCCCTGGAAATTTTTTGAAGTCGTGGAAGTGAAGAGCTCATCAGATTTTCCATCCTGG
TGGGAAATGTGTCAGATGACAGACAGAGGAGCCATTTTAGTGAGACCTGATGAGCATATT
GCTTGGCGTACAAAATCCAGAATTGCAGATCCCATCGCGGAGATGAAAAAAGTTTTCCAC
ATTGTTACAGGAGTTGATTGCATCTGA

Peptide Sequence

PEP ID

XP_016461415.1
PEP Infomation

PREDICTED: putative polyketide hydroxylase isoform X2 [Nicotiana tabacum]
Sequence

MQPQDFDRIVSPVSVAHFSQYKLSRLLLKHLEKLDFCMINSEKREHGSIGERKIFMGHEC
IAINDADHGVSVTASFLTEGKYIKRDIQCRFLVGTDGAGSTVRKSLGINMRGEKDLQNLV
SVHFQSQELGKYLIKERPGMLFFIFNKDAIGVLVAHDLKQGEFVLQVPFYPPQQKLEDFS
CEMCKRLIFKLIGQELADVNVMDIKPWVMHAEVAEKFLSRNNRIILAGDAAHRFPPAGGF
GMNTGIQDAHNLAWKLASVIKGISPISILTSYELERSQIAQFNTALSVQNFKAAMRVPAA
LGLDPTIANAVHRALNNTVGSVLPSGLQRTILDGIFSIGRAQLSDFVLNENNPLGSARLA
KVRQIFEGGQSLQLQFPAEDLGFRYRKGAFVFDDFSGLNAHEAPSGRRRDYIPCSEPGSR
LPHMNVKLLSNPSSKEIFSTLDLVSGDKVEFVLIIAPLEESYYLARAAIEVANNFKVPLK
VCVIWPNGSINETGRSEAASTPWKFFEVVEVKSSSDFPSWWEMCQMTDRGAILVRPDEHI
AWRTKSRIADPIAEMKKVFHIVTGVDCI

Transcript Sequence

Gene sequence data has not been registered.